Package: ggmuller 0.6.0

ggmuller: Create Muller Plots of Evolutionary Dynamics

Create plots that combine a phylogeny and frequency dynamics. Phylogenetic input can be a generic adjacency matrix or a tree of class "phylo". Inspired by similar plots in publications of the labs of RE Lenski and JE Barrick. Named for HJ Muller (who popularised such plots) and H Wickham (whose code this package exploits).

Authors:Robert Noble [aut, cre]

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ggmuller.pdf |ggmuller.html✨
ggmuller/json (API)

Peer review:

Bug tracker:https://github.com/robjohnnoble/ggmuller/issues

On CRAN:

18 exports 64 stars 3.75 score 34 dependencies 4 mentions 50 scripts 322 downloads

Last updated 1 years agofrom:25fd20b278. Checks:OK: 7. Indexed: yes.

Exports:add_empty_popadd_root_rowadd_start_pointsadj_matrix_to_treebranch_singlesfind_start_nodeget_Adjget_edgesget_Muller_dfget_population_dfmove_downmove_rightmove_upMuller_plotMuller_pop_plotpath_vectorpath_vector_newreorder_by_vector

Dependencies:apeclicolorspacedigestdplyrfansifarvergenericsggplot2gluegtableisobandlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepillarpkgconfigR6RColorBrewerRcpprlangscalestibbletidyselectutf8vctrsviridisLitewithr